PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16388.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 231aa    MW: 26594.3 Da    PI: 9.7874
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind64.83.7e-2011391119
   GAGA_bind   1 mdddgsre..rnkg.yye.........paaslke..nlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllall 85 
                 mdd+ +re  r+k   y+         p + +k+   l+++  +++a+rd+ i+ernlal ekka++aerdma lq+d+a+ ern a++e++n+l+al+
  OVA16388.1   1 MDDNKQREngRHKHdPYKllqsqwmipP-HLMKDphALTMKFRTILADRDTVIQERNLALFEKKATLAERDMAILQQDQAIFERNSAMMEQNNALAALE 98 
                 7777666667777666778888888743.355532268899999******************************************************* PP

   GAGA_bind  86 lvensla.....salpvgvqvlsgtksidslqqlse..pql 119
                 ++ ns++      + p g+ v +gtk++++ q+l++  p++
  OVA16388.1  99 YQGNSSVnsnsaPTYPLGCPVPRGTKHMHHQQHLHHhsPHM 139
                 **9998877655567889************99966645544 PP
2GAGA_bind103.94.8e-32144231168253
   GAGA_bind 168 kkksekskkkvkkesad..erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrga 253
                 +k+  k+ +kv k +++  +r   +++  +l+ln+v +Des++P+P+CsC G+l+q YkW  G Wq +CCt t+S+yPLP+++++r++
  OVA16388.1 144 NKRALKPSRKVGKRGCKdlNRCSDPWRRHNLGLNHVYFDESSMPAPICSCRGVLHQGYKWEKGEWQFSCCTSTLSMYPLPAVPNKRHS 231
                 566677778888888776778999**************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDDNKQRENG RHKHDPYKLL QSQWMIPPHL MKDPHALTMK FRTILADRDT VIQERNLALF  60
EKKATLAERD MAILQQDQAI FERNSAMMEQ NNALAALEYQ GNSSVNSNSA PTYPLGCPVP  120
RGTKHMHHQQ HLHHHSPHMA ISSNKRALKP SRKVGKRGCK DLNRCSDPWR RHNLGLNHVY  180
FDESSMPAPI CSCRGVLHQG YKWEKGEWQF SCCTSTLSMY PLPAVPNKRH S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.19e-51BBR-BPC family protein