PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16390.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YC

Protein Properties

Length: 202aa MW: 23058.8 Da PI: 5.2923

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	171.8	7.7e-54	36	135	5	101
NF-YC 5 fwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 f ++q ie+ +dfknh+lPlarikki+kadedv+misaeaP+l+skacelfilelt+rswlhaeenkrrtl+k+di+aa+trtdifdflvdivprde OVA16390.1 36 FLSYQrqeIEQINDFKNHQLPLARIKKIMKADEDVRMISAEAPILFSKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDIVPRDE 134 54444445*****************************************************************************************98 PP NF-YC 101 l 101 OVA16390.1 135 F 135 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MENNNKQQPP QSSSYPPQQP SFHHLMQQQQ QKVQMFLSYQ RQEIEQINDF KNHQLPLARI 60 KKIMKADEDV RMISAEAPIL FSKACELFIL ELTIRSWLHA EENKRRTLQK NDISAAITRT 120 DIFDFLVDIV PRDEFKEEAA RGVTIGRPAL PGIDQGVYVH QPSQAWQSVW QTDDGSYGSG 180 GGDDHGNLDG IGYVEHNPSE SL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	111	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	2e-77	NF-YC family protein