PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16391.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YA

Protein Properties

Length: 383aa MW: 42263.3 Da PI: 7.4815

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	105.5	4.6e-33	176	232	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +ksrkpylheSRh+hA+rR+Rg+gGrF OVA16391.1 176 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKSRKPYLHESRHQHAMRRARGCGGRF 232 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MHSIPGNVNP PESNGQSIPQ STTCSQPWWR GTLCNIDPSA VLGERTSKLS SMEHPDGRMG 60 NNAGELQGDD GLNEGDSVTK EMQTTIASQS GPDGHYGHEH QHLQHVAATM PPPGGEYLIP 120 RPQFELVGHS IACAPYPYSD PYYAGMMTAL GTQAQVHPHL LGMRHTRMPL PLEMAEEPVY 180 VNAKQYHGIL RRRQSRAKAE LEKKLIKSRK PYLHESRHQH AMRRARGCGG RFLNTKKLEN 240 GTATHTTENG MASDCNGNRN SSSGQQEQME SSNGSGEMDP NNQKGIPGLT GVSQAIHSWL 300 GSCVCLGKEE EGRGYLVSHS GFSFCLPISL YESSNVKREK KRNERTPFYF LSLEHWFEDV 360 KQSKLLPGNA VYAVVSSWSD GLL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MHSIPGNVNP PESNGQSIPQ STTCSQPWWR GTLCNIDPSA VLGERTSKLS SMEHPDGRMG  60
NNAGELQGDD GLNEGDSVTK EMQTTIASQS GPDGHYGHEH QHLQHVAATM PPPGGEYLIP  120
RPQFELVGHS IACAPYPYSD PYYAGMMTAL GTQAQVHPHL LGMRHTRMPL PLEMAEEPVY  180
VNAKQYHGIL RRRQSRAKAE LEKKLIKSRK PYLHESRHQH AMRRARGCGG RFLNTKKLEN  240
GTATHTTENG MASDCNGNRN SSSGQQEQME SSNGSGEMDP NNQKGIPGLT GVSQAIHSWL  300
GSCVCLGKEE EGRGYLVSHS GFSFCLPISL YESSNVKREK KRNERTPFYF LSLEHWFEDV  360
KQSKLLPGNA VYAVVSSWSD GLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12840.2	2e-58	NF-YA family protein