PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16469.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 196aa    MW: 22483.9 Da    PI: 9.3997
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.65.1e-211562249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i+ k   qvtfskRrng++KKA+EL++LC+ae a++++s+ gk + +
  OVA16469.1 15 KIKRKDYLQVTFSKRRNGLFKKASELCTLCGAETAIVVYSPAGKAFSF 62
                577777789**********************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEKKTQGRKK IDMEKIKRKD YLQVTFSKRR NGLFKKASEL CTLCGAETAI VVYSPAGKAF  60
SFGHPCVEST MDKFLATASL IEIGESSRGV PSFPDYHRNI GINKLNRHIN ELVNQLEAEK  120
KYGESFTQME MANKDQFLWN KPIKNLEFHE LEQLRVSMEE LKIKMVNRTE GLKRASMLSS  180
FIDINQVGRT EDEGVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-39M-type_MADS family protein