PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16509.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 354aa MW: 41132.5 Da PI: 9.2954

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl OVA16509.1 4 RQRWRAEEDTLLRAYVKQYGPREWNLVSERMNvpLHRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	35.3	2.7e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + OVA16509.1 59 KGSLTEEEQCLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLAKWWEVF 103 5778****************.*****.*******99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MKERQRWRAE EDTLLRAYVK QYGPREWNLV SERMNVPLHR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQCLV IRLQAKHGNK WKKIAAEVPG RTAKRLAKWW EVFKEKQQRE QKENTNSLDP 120 IEEGKYDLIL ETFAQKLVKQ CPTPQFLMTT SNGAFLHSNP PPPPTPPTLL PPWMSTSNGI 180 PTITRPSSPS VALTLSPSTV TPVPTIPWLQ PERSGNCCLS PHEAVPTSRD GHMVSELVEC 240 CRELEEGHRA WAEHKKEAAW RLRRMELQLE SEKVCRRREK MEEIESKIRA LREEEKVMLE 300 RIDLECKEQL AGLKKDAEAK ELKLAEQWIA KHMRLTRFLE QKSCLPRPNE PSVK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MKERQRWRAE EDTLLRAYVK QYGPREWNLV SERMNVPLHR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQCLV IRLQAKHGNK WKKIAAEVPG RTAKRLAKWW EVFKEKQQRE QKENTNSLDP  120
IEEGKYDLIL ETFAQKLVKQ CPTPQFLMTT SNGAFLHSNP PPPPTPPTLL PPWMSTSNGI  180
PTITRPSSPS VALTLSPSTV TPVPTIPWLQ PERSGNCCLS PHEAVPTSRD GHMVSELVEC  240
CRELEEGHRA WAEHKKEAAW RLRRMELQLE SEKVCRRREK MEEIESKIRA LREEEKVMLE  300
RIDLECKEQL AGLKKDAEAK ELKLAEQWIA KHMRLTRFLE QKSCLPRPNE PSVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-131	MYB family protein