PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16570.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 268aa MW: 30874.3 Da PI: 5.2852

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.4e-14	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd++l+++++ +G g+W+ ++++ g+ R+ k+c+ rw ++l OVA16570.1 13 RGPWKPEEDLILKRYIETHGEGNWTIVSKRSGLMRSSKSCRMRWKNHL 60 89********************************************97 PP
2	Myb_DNA-binding	51.6	2.2e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l OVA16570.1 66 RGPISEDEEDLIIRMHKLLGNR-WSLIAGRIP-GRTDNEVKNYWNTHL 111 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MKREETKEEI IKRGPWKPEE DLILKRYIET HGEGNWTIVS KRSGLMRSSK SCRMRWKNHL 60 RPNIKRGPIS EDEEDLIIRM HKLLGNRWSL IAGRIPGRTD NEVKNYWNTH LRKRNIHQGE 120 KMEFNSKKKK LSDTIDTQLT YSGSTSDESN RTDEKGDLQS TAGAQPTSTA INGSSDEEEY 180 NVPSTTTVLP DFSAGDAKSN EDDDDIYSCW LSDETTFYEP FLPPLNYSIL SLESFEHSSD 240 ECWNNKFMIQ LPEDLDPSSA ILHSWPKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	130	RKRNIHQGEKMEFNSKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	1e-56	MYB family protein