PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16571.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 255aa    MW: 29163.3 Da    PI: 6.6042
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.5e-141360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEd+ll+ +++ +G g W+t++++ g+ R +k+c+ rw ++l
       OVA16571.1 13 KGPWKPEEDLLLKSYIETHGEGKWTTVSKRSGLMRGAKSCRMRWKNHL 60
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEREETKEEI IKKGPWKPEE DLLLKSYIET HGEGKWTTVS KRSGLMRGAK SCRMRWKNHL  60
RPNIKRGRLP GRTDNEVKNY WNTHISKRNL HQCQTMGSDY NKKIKRLSHA MDTHSTSTGT  120
TRNETIINTQ PTSNASTRNN DRIRIDGSDE GAGDVSPDTQ PTSTGISAAC HDVIINRSDE  180
GGLLIQSTTL PDLSLADDTR RREDDDILSW WLSDESTFYV PFIPSSSTLD FSVLSFESFD  240
EHSSEECWNK HLSWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.11e-35MYB family protein