PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16677.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 526aa MW: 58837.5 Da PI: 7.923

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.4	5.5e-18	296	396	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+kvlt sd+++ grlvlpk +ae++ ++++ l+++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l+ OVA16677.1 296 FEKVLTASDASRIGRLVLPKACAEAYfprlSLPEGL--PLRIQDAKGNDWVFQFRFwpNNNSRMYVLE-GIAPCIQSMQLEAGDTVTFSRID-PEGKLL 390 99************************77666555..5***********99899999999.*******************987.888888 PP EEEE-S CS B3 94 vkvfrk 99 ++++++ OVA16677.1 391 MGFRKA 396 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MAILQVLEIL NVETLDFGYS VDRLGQYVKM AILPIEPCKY SGLLLENSIA LKDFWLPENW 60 ERDHVLLPPE DLRKIVLDPG EWRRRATSSI KWRKGWDLRC GGFANLCDKC GFAYEQLFFC 120 DTFHLKESGW RECSSCGKRL HCGCIASKSL LELLDDGSVE CISCMKSSHS SMPSDEKPYG 180 FSKMDGHSID VGKILQMGKH MEGNEQNSLL QSLKNDSNGY LSQIKIEQDI PSVGEVGFTR 240 PPVARPEATK DMLHVARPTV EGRGRNQLLP RYWPRLTEQE LQQISGHSKS TIVPLFEKVL 300 TASDASRIGR LVLPKACAEA YFPRLSLPEG LPLRIQDAKG NDWVFQFRFW PNNNSRMYVL 360 EGIAPCIQSM QLEAGDTVTF SRIDPEGKLL MGFRKASTSN SVALQVIPPD ICSYTLRSHG 420 CGKTCYGVPD DVSPKELENL LRLNMDFKKR RITANEKAAQ EHEASSGLDT LATTAVLGEN 480 WGDSNTPSVL TTSKHPRHRL GCTCIVCIQS SPSGKGPKHK PTRTCK

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MAILQVLEIL NVETLDFGYS VDRLGQYVKM AILPIEPCKY SGLLLENSIA LKDFWLPENW  60
ERDHVLLPPE DLRKIVLDPG EWRRRATSSI KWRKGWDLRC GGFANLCDKC GFAYEQLFFC  120
DTFHLKESGW RECSSCGKRL HCGCIASKSL LELLDDGSVE CISCMKSSHS SMPSDEKPYG  180
FSKMDGHSID VGKILQMGKH MEGNEQNSLL QSLKNDSNGY LSQIKIEQDI PSVGEVGFTR  240
PPVARPEATK DMLHVARPTV EGRGRNQLLP RYWPRLTEQE LQQISGHSKS TIVPLFEKVL  300
TASDASRIGR LVLPKACAEA YFPRLSLPEG LPLRIQDAKG NDWVFQFRFW PNNNSRMYVL  360
EGIAPCIQSM QLEAGDTVTF SRIDPEGKLL MGFRKASTSN SVALQVIPPD ICSYTLRSHG  420
CGKTCYGVPD DVSPKELENL LRLNMDFKKR RITANEKAAQ EHEASSGLDT LATTAVLGEN  480
WGDSNTPSVL TTSKHPRHRL GCTCIVCIQS SPSGKGPKHK PTRTCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	2e-77	B3 family protein