PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16694.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 151aa    MW: 16790.1 Da    PI: 8.727
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.55.5e-095880527
                --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                 C++f rtG+C++Gd+Ck+ H++
  OVA16694.1 58 VCNHFVRTGFCQFGDSCKYFHPK 80
                5********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MPLAKYYCDY CDKQFQDTAS ARKRHLQGLQ HQRAKALWYD SLKDPNRNQA ESFGKAGVCN  60
HFVRTGFCQF GDSCKYFHPK QNVNIPGVMV TNFTETVQSP VILGNQLTGR GGSVPVDMIR  120
DGMGISLGNL PPSLRPPPEG GYPPLPFVDW G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.14e-35C3H family protein