PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16719.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB
Protein Properties Length: 326aa    MW: 37072.8 Da    PI: 6.371
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.41.8e-192572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd+ll+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
       OVA16719.1 25 RGPWTVEEDLLLINYITNHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 72
                     89********************************************97 PP
2Myb_DNA-binding51.22.8e-1678121146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
       OVA16719.1  78 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDEMDVKGMI SATQSDQEDQ MDLRRGPWTV EEDLLLINYI TNHGEGRWNS LARCAGLKRT  60
GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL ELHSRWGNRW SKIAQHLPGR TDNEIKNYWR  120
TRVQKHAKQL QCDVNSKQFK DTMRYLWMPR LAERIQAAAT TSGGATTNHH HHHHLNNINT  180
NTSTNNNIYN PDFSEGHILP ASTNNEFSGS QNFTTPENSS TAASSDSMGT TDQFASSVSD  240
LKDCYSFQTN NNNTNIINTQ SPHTNFAESL FSPSSNYFNR GFELQGNVEQ NSMWLGGGGG  300
GGEDVLENLW NVEDIWFLQQ QLCNGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.18e-85MYB family protein