PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16833.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 211aa    MW: 22750.1 Da    PI: 9.1199
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000185274123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  OVA16833.1 52 FECQYCRREFANSQALGGHQNAH 74
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MADSSIPVKS SPDDLNHQSD RKPNSVLKLF GFSVTEHDET PVTSENRDNR KFECQYCRRE  60
FANSQALGGH QNAHKKERQR AKRAQFQSIR RFTTGSPILS PHAVRSGPFI YSSGHTNFNG  120
GGGGGGGGAA APRFHTPAAE YYASASPHQM LPSISPHAPS WFYVPRPPTF TIVNDNGTTA  180
AASSITEFPG KSSEVDVGLD LHLSLAPSST P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.11e-13C2H2 family protein