PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16848.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARR-B

Protein Properties

Length: 670aa MW: 73360.5 Da PI: 6.105

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.1	3.6e-27	211	264	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ eLH++Fv av+qL ++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl OVA16848.1 211 KQRVVWSVELHQQFVAAVNQL-SIDKAVPKKILELMNVPGLTRENVASHLQKYRL 264 79*****************.9*****************************8 PP
2	Myb_DNA-binding	38	3.7e-12	213	263	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+ql + +k+I + m+ g+t++++ s++qky+ OVA16848.1 213 RVVWSVELHQQFVAAVNQLSIDkaVPKKILELMNvPGLTRENVASHLQKYR 263 678***********************************************7 PP
3	Response_reg	72.5	1.7e-24	34	142	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+++l + y ev++++++ al +l+ek+ +Dl+l D+ mp+mdG++ll++i e +lp+i++++ +++e + + + Ga OVA16848.1 34 VLVVDDDLTCLKILERMLHHCLY-EVTTCSQAVVALSILREKKymFDLVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSMDDKKEVVMKGVTHGAC 128 89*****************99.*************999999******************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e++ + OVA16848.1 129 DYLIKPIRMEAIKN 142 *******99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MMNMDKGGGG GGGTLSMASS GEGVSGQFPA GLRVLVVDDD LTCLKILERM LHHCLYEVTT 60 CSQAVVALSI LREKKYMFDL VLSDVHMPDM DGFKLLEHIG LEMDLPVIMM SMDDKKEVVM 120 KGVTHGACDY LIKPIRMEAI KNIWQHVVRK RRNELKELEQ SGSVEDGERI RKPSDDADNA 180 SSANEGSWKN SKKRKEEEDE EDRDDSSTLK KQRVVWSVEL HQQFVAAVNQ LSIDKAVPKK 240 ILELMNVPGL TRENVASHLQ KYRLYLKRLS GGPQTGLNTP FMGTSDANFG PMSSFDGFNL 300 QSLTVPGQLP PQSLATLQAG GLARVTAHGG MNMQIADQRN LFSAETPRLR FGVGPQLSNN 360 NQVNLLRGLP SSMEQKQLTH LHQPVQSFGN TSLQSFGNTG LQVSEGSSRY VKLPMGSLGT 420 GSSARVDPVH RNESNALMMQ MAQSQLRGQL FSNEIAGRVL GGNGAVTNGR GAVQNPVSQA 480 SPMADFSMKR VTDLTGHGFP LGSSAGVPSL QSAGTFQDGG SSGVKGPRGF NPSYDIFNEL 540 QQNKTPDWDL QSVGLTFDTS RNTNPAQCNI DPSLSGLGQQ GFLSSQKNRE REEQHGNPEI 600 SQCHENLRVE NDFRVKTESL PELNSDNFVY TRHWGQDDLM SALLKQQQDG IGPVETELNF 660 DGYSMDNISA

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MMNMDKGGGG GGGTLSMASS GEGVSGQFPA GLRVLVVDDD LTCLKILERM LHHCLYEVTT  60
CSQAVVALSI LREKKYMFDL VLSDVHMPDM DGFKLLEHIG LEMDLPVIMM SMDDKKEVVM  120
KGVTHGACDY LIKPIRMEAI KNIWQHVVRK RRNELKELEQ SGSVEDGERI RKPSDDADNA  180
SSANEGSWKN SKKRKEEEDE EDRDDSSTLK KQRVVWSVEL HQQFVAAVNQ LSIDKAVPKK  240
ILELMNVPGL TRENVASHLQ KYRLYLKRLS GGPQTGLNTP FMGTSDANFG PMSSFDGFNL  300
QSLTVPGQLP PQSLATLQAG GLARVTAHGG MNMQIADQRN LFSAETPRLR FGVGPQLSNN  360
NQVNLLRGLP SSMEQKQLTH LHQPVQSFGN TSLQSFGNTG LQVSEGSSRY VKLPMGSLGT  420
GSSARVDPVH RNESNALMMQ MAQSQLRGQL FSNEIAGRVL GGNGAVTNGR GAVQNPVSQA  480
SPMADFSMKR VTDLTGHGFP LGSSAGVPSL QSAGTFQDGG SSGVKGPRGF NPSYDIFNEL  540
QQNKTPDWDL QSVGLTFDTS RNTNPAQCNI DPSLSGLGQQ GFLSSQKNRE REEQHGNPEI  600
SQCHENLRVE NDFRVKTESL PELNSDNFVY TRHWGQDDLM SALLKQQQDG IGPVETELNF  660
DGYSMDNISA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-161	ARR-B family protein