PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16927.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 90aa    MW: 9946.27 Da    PI: 6.789
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind53.79.4e-1719026110
   GAGA_bind  26 lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.....salpvgvqvlsgtksids 110
                 ++ m+++a+rd+ i+ernlalsek+aa+ae d a lq+d+a+ + n a++e+dn+l+al+++ ns++      + p g+ v +gtk++++
  OVA16927.1   1 MKFMTILADRDTVIQERNLALSEKNAALAEGDTAILQQDQAIFKWNSAMMEKDNALAALEYRGNSSVnsnsaPTYPLGCPVPRGTKHMHH 90 
                 578************************************************************998877555556788999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MKFMTILADR DTVIQERNLA LSEKNAALAE GDTAILQQDQ AIFKWNSAMM EKDNALAALE  60
YRGNSSVNSN SAPTYPLGCP VPRGTKHMHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-24BBR-BPC family protein