PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16976.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 427aa MW: 48824.5 Da PI: 7.2972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	177	223	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v+q+G + W+ Ia++++ gR +kqc++rw+++l OVA16976.1 177 KGQWTMEEDRLLVHLVEQFGVRKWSHIAQMLN-GRIGKQCRERWHNHL 223 799***************************.***********97 PP
2	Myb_DNA-binding	55.5	1.3e-17	231	271	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W++eEd++l++a+ + G++ W+ Ia++++ gRt++++k++w+ OVA16976.1 231 IWSEEEDKILIQAHIEIGNK-WAEIAKRLP-GRTENSIKNHWN 271 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MLENYLKPEF DDGFSMEACS SKGVFQEIQK LDHQFGVDGM FSNSKFGIPS TQYVDPFEAF 60 TTGNSPNFDG FESKPFAEGG GCNTNGFMMM EKFQNIGFLN YPPHLITPTP PDEVVMEQDQ 120 SHLPLSFQEF QSVNLGIPDE LSCITADTGI YRKVALKKKN MSMKRTGKGQ KKSNPVKGQW 180 TMEEDRLLVH LVEQFGVRKW SHIAQMLNGR IGKQCRERWH NHLRPNIKKD IWSEEEDKIL 240 IQAHIEIGNK WAEIAKRLPG RTENSIKNHW NATKRRQFSR RRCRSSKYPK SSSLLQNYIK 300 TLGSNSTGGG ANHRNNPLVP LNATIANTNI HRAPMTQPPD QKLLEFCSSD RLVPNYDFND 360 VTEFCFDTKV FPERYSLGSL FDEMPCGTSF VDDQMEMMMP VEMGSLMQGE VKRELDLVEM 420 ITQTTKM

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MLENYLKPEF DDGFSMEACS SKGVFQEIQK LDHQFGVDGM FSNSKFGIPS TQYVDPFEAF  60
TTGNSPNFDG FESKPFAEGG GCNTNGFMMM EKFQNIGFLN YPPHLITPTP PDEVVMEQDQ  120
SHLPLSFQEF QSVNLGIPDE LSCITADTGI YRKVALKKKN MSMKRTGKGQ KKSNPVKGQW  180
TMEEDRLLVH LVEQFGVRKW SHIAQMLNGR IGKQCRERWH NHLRPNIKKD IWSEEEDKIL  240
IQAHIEIGNK WAEIAKRLPG RTENSIKNHW NATKRRQFSR RRCRSSKYPK SSSLLQNYIK  300
TLGSNSTGGG ANHRNNPLVP LNATIANTNI HRAPMTQPPD QKLLEFCSSD RLVPNYDFND  360
VTEFCFDTKV FPERYSLGSL FDEMPCGTSF VDDQMEMMMP VEMGSLMQGE VKRELDLVEM  420
ITQTTKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-73	MYB family protein