PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16988.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 199aa MW: 22506 Da PI: 5.9426

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.4e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G g W++ ar g++Rt+k+c++rw++yl OVA16988.1 15 KGPWTMEEDMILINYIANHGEGVWNSLARSAGLNRTGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.9	9.6e-18	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++ OVA16988.1 68 RGNITPEEELLIMELHAKWGNR-WSKIASHLP-GRTDNEIKNYWRT 111 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MDKKPCNSQE SEVRKGPWTM EEDMILINYI ANHGEGVWNS LARSAGLNRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEELLIM ELHAKWGNRW SKIASHLPGR TDNEIKNYWR TKIQKNIKQP 120 DSLPSQSTDQ THCSGGTSTS HTMSGGGCGA DQDGTENYSP MYTENNLAPE GFPAPLPTES 180 NDNLWSMEDL WSMQLLHGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	3e-81	MYB family protein