PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17111.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 231aa MW: 25519.2 Da PI: 7.3976

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	97.5	1.4e-30	2	101	1	95
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C++ C+l+p++ p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e+ OVA17111.1 2 SCNGCRVLRKGCSEACILRPCLqwidsPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLFEACGRTVNPVNGAVGLLSTGNWHVCQAAVET 100 6**********************************************************************************************9997 PP DUF260 95 a 95 + OVA17111.1 101 V 101 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MSCNGCRVLR KGCSEACILR PCLQWIDSPE AQGHATVFVA KFFGRAGLMS FISAVPENQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLSTGN WHVCQAAVET VFRGGILRPI SVVLGGTLSP 120 ESDEASELEF ECTDHHVEKT RDLCSRSKDS KRKRFEDEVK LELKDLNLSL TPLFPKKVIS 180 NKIGAEIITH HRQQPPIPSM TSAESTDTTY FDCKAAGDHT RTERNLLNLF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	4e-81	LBD family protein