PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17113.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 238aa    MW: 26365.3 Da    PI: 4.5357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-05185224954
                 HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 Er+ R+++++ +  Lr ++P  +       ++ a++L +Av+Y+ksL
  OVA17113.1 185 ERK-RQKMKEMMKALRGIVPGgD------QMNSAAVLDEAVKYLKSL 224
                 555.69**************955......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MQSDQNFYNR NAVPPLSYQV GGGYINAPMA PTLPPCAKQL RPFNGVELQP FEVCPRNFII  60
VDQTDNRSRI MFHPALAEKF NYPDFDVQDN GMMKDTAAGT GTENRESSYP MKEDTEDINV  120
LLSLDGEEEE EEEDEDEEEV STARTLGSSG SSSPDSCSTY GSRPSKVRLS SSTQKSFSCS  180
SSKSERKRQK MKEMMKALRG IVPGGDQMNS AAVLDEAVKY LKSLKVEVKK LGIGNFND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.16e-19bHLH family protein