PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17202.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 208aa    MW: 22741 Da    PI: 3.8851
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.5e-071344132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g W++eEd++l ++    G g+W+ +ar  g
       OVA17202.1 13 KGLWSPEEDDKLMNYMLSNGQGCWSDVARNAG 44
                     678**************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MVNNNTKLAK LRKGLWSPEE DDKLMNYMLS NGQGCWSDVA RNAGLQSNYL FDDQQPLPNM  60
LLDESCSFNI NNLPTCITQS VGIGGGGGGG GGGGGFYGSC SHGVMEINGS STKLNNMEGD  120
DHDLFVPNLE SSLSIEENIT TTATTEKTFE NNIIINTNNN NNNKVVENLL FGSGNYWEGE  180
NLRMGEWDLV ELMEDVSSSF PFLDFQVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-17MYB family protein