PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17217.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WRKY

Protein Properties

Length: 616aa MW: 67951.3 Da PI: 8.4252

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.7e-33	236	293	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k OVA17217.1 236 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 293 7**************************************.*************85 PP
2	WRKY	102.2	2.9e-32	416	474	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+ +d ++v++tYeg+Hnh+ OVA17217.1 416 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERACHDLRAVITTYEGKHNHD 474 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MTTSFSDLLA GGNEYTDNYQ NNINKERITV SRGFSDRIAD RIGSGVPKFK SIPPPSLPIS 60 PPSASPSSYF SIPPGLSPAE LLDSPVLLST SNILPSPTTG TFPAHSFNWK GNSGNFQQNV 120 KQEDRNYSDF SFQQPQTRPL SNFNSSSSTT MSTKQPWNSQ EPPIKQLSTD FSSVRNTTSI 180 VKSESITPLQ SFSPEISTIQ ANNNTQSNGG GNQSDYNNNN SSYSHHQTLR EKRRSEDGYN 240 WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERSLDGQI TEIVYKGSHN HPKPQSTRRS 300 SSSSSHHQIH QAAAVPTSSE VSDQFLSTTH HGGMTTTQME LVTTPENSSI SIGDDDLDQT 360 SQKTKSGGDE FEEDIEPDPK RWKKDSENEG ISAIGGSRTV REPRVVVQTT SDIDILDDGY 420 RWRKYGQKVV KGNPNPRSYY KCTSVGCPVR KHVERACHDL RAVITTYEGK HNHDVPAARG 480 SGSINRPITT SIASHDNNNN VHALALSTTH HVRPYSSSSS SSVTTTAGTA PNQSNNMNHL 540 GINNVRSMPM SEGQTPFTLE MLQSPGSFGF SGFNNPSMSS SSYMNLQQQQ HSGGVFSKTK 600 EEPKDNNDMF LESLLY

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MTTSFSDLLA GGNEYTDNYQ NNINKERITV SRGFSDRIAD RIGSGVPKFK SIPPPSLPIS  60
PPSASPSSYF SIPPGLSPAE LLDSPVLLST SNILPSPTTG TFPAHSFNWK GNSGNFQQNV  120
KQEDRNYSDF SFQQPQTRPL SNFNSSSSTT MSTKQPWNSQ EPPIKQLSTD FSSVRNTTSI  180
VKSESITPLQ SFSPEISTIQ ANNNTQSNGG GNQSDYNNNN SSYSHHQTLR EKRRSEDGYN  240
WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERSLDGQI TEIVYKGSHN HPKPQSTRRS  300
SSSSSHHQIH QAAAVPTSSE VSDQFLSTTH HGGMTTTQME LVTTPENSSI SIGDDDLDQT  360
SQKTKSGGDE FEEDIEPDPK RWKKDSENEG ISAIGGSRTV REPRVVVQTT SDIDILDDGY  420
RWRKYGQKVV KGNPNPRSYY KCTSVGCPVR KHVERACHDL RAVITTYEGK HNHDVPAARG  480
SGSINRPITT SIASHDNNNN VHALALSTTH HVRPYSSSSS SSVTTTAGTA PNQSNNMNHL  540
GINNVRSMPM SEGQTPFTLE MLQSPGSFGF SGFNNPSMSS SSYMNLQQQQ HSGGVFSKTK  600
EEPKDNNDMF LESLLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-107	WRKY family protein