PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17274.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 462aa    MW: 53095.1 Da    PI: 5.0289
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-11413460347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      +W+  E++ l +avk+ G g+Wk+I  +     + Rt  ++k++w++ 
       OVA17274.1 413 KWSSAEEQTLREAVKECGRGNWKLILDRYRetfEERTVVDLKDKWRNM 460
                      8********************************9************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MDIDVARWIQ EFLLQQPIED RTMKTLLDIL PYDNDDYRLM KRILLRSISS EISKGSVSEK  60
TLETLEIIEE YDYQRGIVVL DSMREAYCAV AVHCTVMCLK ENPYDFRNYF DAVIRIWRYR  120
ISDMEICERV GLVSERLKDT RDVIEEALWN VDVRNDVLTR DTWNDALISL KVYLADATEE  180
IGPSFLEIVA KTEIAAKTMN GKGKEVHISA KNLQADQTEE REAFSSDVPR ENFDVNIGDH  240
LGHKGRDMAM DSCMEIPRAT NHEYAIIATP EVRKVQEALK LSTLDLQAVV KDPLPDALHL  300
AATISASMAR EETNNSVENQ NVVDKGACVP SVDEGVKVVD TDEANTRNPS TVSRPSLMVR  360
NCTARTYEWD NDSIESSYEG SPNRPHLPTP RKRVVSPLSK QEIRKNSRRK IKKWSSAEEQ  420
TLREAVKECG RGNWKLILDR YRETFEERTV VDLKDKWRNM TR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.24e-16MYB_related family protein