PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17413.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 480aa MW: 53555.5 Da PI: 5.2489

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.7e-06	14	46	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ ++e+ + l+C+ ++ lC C l+ H+ OVA17413.1 14 TPCDFCSEEIAVLYCRADSAKLCLFCDLHVHSA 46 68***************************9954 PP
2	zf-B_box	23.1	1.5e-07	56	100	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+++++++++ C +++ llC++C +H + H++ p OVA17413.1 56 SQICDNCSSEPVSVRCSTDNLLLCQECDWDSHGNcsvsasHERHP 100 689****************************96588888876655 PP
3	CCT	52.3	2e-18	426	472	1	45
CCT 1 ReaallRYkeKrktRkF..eKkirYesRKavAesRpRvKGrFvkqae 45 R +a+lRYkeK+ktR+ + +irYesRKa+A++R+RvKGrFvk++e OVA17413.1 426 RGNAMLRYKEKKKTRRHgsSLHIRYESRKARADTRKRVKGRFVKASE 472 7789*********9733568********************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MEKNLNPGSA ERTTPCDFCS EEIAVLYCRA DSAKLCLFCD LHVHSANDLS RKHVRSQICD 60 NCSSEPVSVR CSTDNLLLCQ ECDWDSHGNC SVSASHERHP VEGFTGCPSG LELASIWGFD 120 LGEKNSLIPQ QQQQPQMLQS NNDSMFQNWS TLDSILSADS WMYKSSSGMS FQDLMVPNGN 180 NASLFPNVPS AEIPALSKRQ NPTCGKHKQI MLKQLVELLK RDPVGRDEIS NKEQENIQSN 240 IDACNGVGEA MDGNDSFQQQ IPFTSLLMLP VRSDLKENDR HLGEEDVLWD CIPPADQSTQ 300 IWDFNLGRSR DNEERNRLEV GYGTSDAEFM MKSYSELITE TPFTNTLEDI ESQNPNSNNT 360 AANQGPTTSG SNNIHKLAPS SGSTMAKPET SSSVRDIHFM EQPFLVKGDT ARATTQADME 420 LLAQNRGNAM LRYKEKKKTR RHGSSLHIRY ESRKARADTR KRVKGRFVKA SEAPDVENSS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MEKNLNPGSA ERTTPCDFCS EEIAVLYCRA DSAKLCLFCD LHVHSANDLS RKHVRSQICD  60
NCSSEPVSVR CSTDNLLLCQ ECDWDSHGNC SVSASHERHP VEGFTGCPSG LELASIWGFD  120
LGEKNSLIPQ QQQQPQMLQS NNDSMFQNWS TLDSILSADS WMYKSSSGMS FQDLMVPNGN  180
NASLFPNVPS AEIPALSKRQ NPTCGKHKQI MLKQLVELLK RDPVGRDEIS NKEQENIQSN  240
IDACNGVGEA MDGNDSFQQQ IPFTSLLMLP VRSDLKENDR HLGEEDVLWD CIPPADQSTQ  300
IWDFNLGRSR DNEERNRLEV GYGTSDAEFM MKSYSELITE TPFTNTLEDI ESQNPNSNNT  360
AANQGPTTSG SNNIHKLAPS SGSTMAKPET SSSVRDIHFM EQPFLVKGDT ARATTQADME  420
LLAQNRGNAM LRYKEKKKTR RHGSSLHIRY ESRKARADTR KRVKGRFVKA SEAPDVENSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	1e-103	CO-like family protein