PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17470.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 67aa    MW: 7629.88 Da    PI: 10.1186
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.71.8e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien++nrqvtfskRrng+lKKA+ELSvLC+aeva++ifs+tgk + ++s
  OVA17470.1  9 KRIENTTNRQVTFSKRRNGLLKKAFELSVLCEAEVALVIFSPTGKAFQFAS 59
                79*******************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MGRGKVELKR IENTTNRQVT FSKRRNGLLK KAFELSVLCE AEVALVIFSP TGKAFQFASQ  60
ECVYNYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.12e-30MIKC_MADS family protein