PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17588.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 764aa MW: 84994.9 Da PI: 6.6707

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.2	4.1e-15	2	76	19	99
-HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 19 pkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 p kfa+++ +++ ++ led++g++W+v l + +g+ +++GW eF++++ L+ gDfvvF ++ s f vv++++k OVA17588.1 2 PPKFARTIaSLV---DQVTYLEDPKGQRWRVML--SIVDGSLAIQQGWHEFASDHSLEIGDFVVFNYIAGSHF--VVQMYSK 76 889999996444...34689***********..8899999************************88999..9998876 PP
2	B3	34.8	3e-11	497	565	26	97
T---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 26 hggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ +e k + l+d+ r+W v + +sg vl++GW+ +kan+++ gD++ +++++ se l +++ OVA17588.1 497 RRSN-TERKIVLLKDSAMRKWPVLY--HERSGFRVLASGWEALAKANNIQPGDICSLRVENISESLLQLGIQ 565 3444.456789999*********..99999***********************965446655666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MPPKFARTIA SLVDQVTYLE DPKGQRWRVM LSIVDGSLAI QQGWHEFASD HSLEIGDFVV 60 FNYIAGSHFV VQMYSKSGCE KLNFSEKRND NRGKRIRAKR SSGKLPSDGR NSSASKAPSE 120 MTDKGSVNEQ GSTSTIHSKF DVEILESKSD AKDVAKVKMA TGMTSHCHNS KRTSQPMKQV 180 DFTEVPFYMI DRNSLDKQGA STSSLFDLSN FEMPSRKSSA DGMDKKVPEV IKIENSSNSD 240 VNPVQPQTTL KNNCVEEQCH IIDEVPVGKD GKNSGGCIDV SDLEVRDDVS EFEMPERNYN 300 AETADQVPLA TDEMLCFSNI SIPPTTKSTM DCSENEMENL GISNGALNKP PFTKELNAVY 360 SGIDPVILQR EHTPQESSGR VPQIFSITSG NSENPVTMQA KDNRAGKVPE VVEKVHEEKV 420 KENHGERPVI VKVEPEEKFD FCLGVEAKAC KVVKTESIDL APLSPPSSVN FFCSAPAETQ 480 SFLELPVDLP AFSCKGRRSN TERKIVLLKD SAMRKWPVLY HERSGFRVLA SGWEALAKAN 540 NIQPGDICSL RVENISESLL QLGIQRKKLY KQREKQEGLY HYHLSLQNKR TEMKREGRQH 600 GMVRSYMILP SPLNPTPKSK IVNKLDSRPT AGLYTKVSSK PTNHSKFTGK CGAPRCTDCH 660 AHPVNKSKDK AKGTQKLKSC DVAMNHRSLA WRVVHKGNAL NYDGKSATGI LCHISSEFDD 720 DYDDEVEDYD GDELCTLAEG AIMSKQIGFV LDDQVENDEG WCML

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MPPKFARTIA SLVDQVTYLE DPKGQRWRVM LSIVDGSLAI QQGWHEFASD HSLEIGDFVV  60
FNYIAGSHFV VQMYSKSGCE KLNFSEKRND NRGKRIRAKR SSGKLPSDGR NSSASKAPSE  120
MTDKGSVNEQ GSTSTIHSKF DVEILESKSD AKDVAKVKMA TGMTSHCHNS KRTSQPMKQV  180
DFTEVPFYMI DRNSLDKQGA STSSLFDLSN FEMPSRKSSA DGMDKKVPEV IKIENSSNSD  240
VNPVQPQTTL KNNCVEEQCH IIDEVPVGKD GKNSGGCIDV SDLEVRDDVS EFEMPERNYN  300
AETADQVPLA TDEMLCFSNI SIPPTTKSTM DCSENEMENL GISNGALNKP PFTKELNAVY  360
SGIDPVILQR EHTPQESSGR VPQIFSITSG NSENPVTMQA KDNRAGKVPE VVEKVHEEKV  420
KENHGERPVI VKVEPEEKFD FCLGVEAKAC KVVKTESIDL APLSPPSSVN FFCSAPAETQ  480
SFLELPVDLP AFSCKGRRSN TERKIVLLKD SAMRKWPVLY HERSGFRVLA SGWEALAKAN  540
NIQPGDICSL RVENISESLL QLGIQRKKLY KQREKQEGLY HYHLSLQNKR TEMKREGRQH  600
GMVRSYMILP SPLNPTPKSK IVNKLDSRPT AGLYTKVSSK PTNHSKFTGK CGAPRCTDCH  660
AHPVNKSKDK AKGTQKLKSC DVAMNHRSLA WRVVHKGNAL NYDGKSATGI LCHISSEFDD  720
DYDDEVEDYD GDELCTLAEG AIMSKQIGFV LDDQVENDEG WCML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	4e-12	B3 family protein