PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17668.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 301aa MW: 34362.5 Da PI: 9.433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.4e-09	29	72	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 rWT eE +++ +a +++ ++ +W +Ia++++ g+t ++ + OVA17668.1 29 RWTHEENKRFENALALYDKDtpdRWQRIAAMIP-GKTVMDVMKQY 72 9******************************.*98887766 PP
2	Myb_DNA-binding	42.4	1.6e-13	130	174	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + k++G+g+W+ I+r + Rt+ q+ s+ qky OVA17668.1 130 PWTEDEHRLFLLGLKKYGKGDWRNISRNFVVSRTPTQVASHAQKY 174 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MMKWGMEILS PQSYLPNSNW LLEDSKNTRW THEENKRFEN ALALYDKDTP DRWQRIAAMI 60 PGKTVMDVMK QYKELEDDVS YIEAGLVPIP GYTTSSFTLD WVNNRSFDGS NGKRSSSTRP 120 SDQERKKGVP WTEDEHRLFL LGLKKYGKGD WRNISRNFVV SRTPTQVASH AQKYFIRQLS 180 GGKDKRRSSI HDITTVNLTD IRPPSPDSNT STIEQSTLLT QQRNQNCAPK AIFDWNQTHD 240 GENMVFSPAH GNLYVPPPYG MNSFGMKMQG QSLHRGSLHG SHMGVHSTVF QMQSSQCHPH 300 G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	7e-99	MYB family protein