PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17722.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 403aa MW: 43359.4 Da PI: 5.3221

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.4e-18	48	93	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar ++ gR++k+c++rw + OVA17722.1 48 KGPWSPEEDAILSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 93 79****************************.*********985 PP
2	Myb_DNA-binding	56.8	5.1e-18	100	144	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ OVA17722.1 100 RKPFTDEEDRIIVAAHAIHGNK-WASIARLLQ-GRTDNAIKNHWNST 144 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MNTDEVIAVS GGGGGDGGGD GGNLVGGGVI GTTGGGGRVG SGSDDRVKGP WSPEEDAILS 60 RLVSKFGARN WSLIARGIPG RSGKSCRLRW CNQLDPCVKR KPFTDEEDRI IVAAHAIHGN 120 KWASIARLLQ GRTDNAIKNH WNSTLRRRCI DFGRYKAMPA EMLEDVSLDK NKASSEETLS 180 CGDANSSKSL EGKDVVNSQE NISNQFEDRT QGIEDYSEPK EPPTLFRPVA RVSAFSVYNP 240 PDGPATDSPF SRIVARPGPL IQASKPDVGI CQLLQSVCGD PLVPPQCGYG CCGAQRGQHQ 300 SSLLGPEFVE FVEPPSFSAH ELASLATDIS NIAWIKSGVE QILDNASSQV MSQGDQDQVG 360 QLEESRMNDH LRFEEGRNKL TGMMTEVLST QMARQQFALP AKS

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MNTDEVIAVS GGGGGDGGGD GGNLVGGGVI GTTGGGGRVG SGSDDRVKGP WSPEEDAILS  60
RLVSKFGARN WSLIARGIPG RSGKSCRLRW CNQLDPCVKR KPFTDEEDRI IVAAHAIHGN  120
KWASIARLLQ GRTDNAIKNH WNSTLRRRCI DFGRYKAMPA EMLEDVSLDK NKASSEETLS  180
CGDANSSKSL EGKDVVNSQE NISNQFEDRT QGIEDYSEPK EPPTLFRPVA RVSAFSVYNP  240
PDGPATDSPF SRIVARPGPL IQASKPDVGI CQLLQSVCGD PLVPPQCGYG CCGAQRGQHQ  300
SSLLGPEFVE FVEPPSFSAH ELASLATDIS NIAWIKSGVE QILDNASSQV MSQGDQDQVG  360
QLEESRMNDH LRFEEGRNKL TGMMTEVLST QMARQQFALP AKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-105	MYB family protein