PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17799.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 170aa    MW: 19155.2 Da    PI: 5.2633
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.6e-053254123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  OVA17799.1 32 YECTFCKRGFSNAQALGGHMNIH 54
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEITGFQSVE NSDQMAWTSV EQRPSHVIIR SYECTFCKRG FSNAQALGGH MNIHRKDRVK  60
MKQQPSSSDI TKTTNSSDPP VYADQNKFDL EYSNEETHVV PPLGQLPLFG ENPSCRDDPK  120
PNDRGGRCED SKPMQSSHAL AREELDLELR LGPQPDQHTM PSTTGTIDFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.17e-17C2H2 family protein