PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17860.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HSF
Protein Properties Length: 254aa    MW: 27086.4 Da    PI: 5.8619
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind75.59.3e-24180238260
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                   Fl+k+y++++d+ l+++isw +ng+sfvvld+ efa+ vLp+ Fkh+nf+SFvRQLn+Y
    OVA17860.1 180 FLSKTYDLVDDPLLDKVISWGSNGQSFVVLDPVEFARGVLPRNFKHNNFSSFVRQLNTY 238
                   9********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MNPKDKSFSH PTNKSSPSSS SSLPTDFKIF SATETSSFQL GSVSIISPGK KLGLPEMKPL  60
LSVTPASSPL MEFEPFSPGR ASPSIFVESS KGSTFEESSG GFTGSSSSSP LNEIEALTAM  120
KPSSSLRIER KESSNREKFS ETGGGFIGGR DSGFQVKSEG ENSGVPQPLE CLQGNPIPPF  180
LSKTYDLVDD PLLDKVISWG SNGQSFVVLD PVEFARGVLP RNFKHNNFSS FVRQLNTYVG  240
IAVTQPATAG VICM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.14e-37HSF family protein