PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17879.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 544aa MW: 59642.6 Da PI: 6.9027

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.2	3.3e-16	160	248	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a+ e+ +l+rg+l++ +Weev+ + +++ +s +qCk+k +nl+kryk + +++++ ++s++p+f+++e OVA17879.1 160 EWSDTAIGTLLDAYMEKFVQLNRGNLRGRDWEEVATIVsercDKQKAGKSVEQCKNKVDNLKKRYKVELNRMNSS-GSTVSHWPWFKKIE 248 5******************************987776655889999**************887777764.456669****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MASCDDDFSL LGEDHHHHHQ TFTSFKATPI NSQQPQQQSH PINILGGTES PNKAGGTTTA 60 EEDGDEDYSG PPTFHDVNAF GEDESNPFGA DDESDPNKSR ANSRSEKRKD QEELSDGGTT 120 YSYKKTKPTT TPNTTTITIS TSSVGMDYRY RGEYRKDREE WSDTAIGTLL DAYMEKFVQL 180 NRGNLRGRDW EEVATIVSER CDKQKAGKSV EQCKNKVDNL KKRYKVELNR MNSSGSTVSH 240 WPWFKKIEQI VGNSPSSKAV SDEDKSPGSS ANMLRQPKRY AVIAPRPVGM GNTMNPKSLS 300 NPRWQRVVFK ISGAALAGTG PQNIDPKVAM LIAREVAMAC RLGVEVAIVI GGRNFFCGDT 360 WVAATGLDRS TAYQIGMMAT VMNSVLLQSA LEKQGVQTRV QTAFPMHEVA EPYSKRRAIR 420 HLEKGRVVIF GGVGAGTGNP LFTTDTAAAL RASEINAEAV LKGTNVDGVY DSQSRNNNNV 480 AFEHISYREL VSRGVTSMDM MAITFCEENG IPVVVFNLLE PGNISRALCG NQVGTLIDQS 540 GRMS

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MASCDDDFSL LGEDHHHHHQ TFTSFKATPI NSQQPQQQSH PINILGGTES PNKAGGTTTA  60
EEDGDEDYSG PPTFHDVNAF GEDESNPFGA DDESDPNKSR ANSRSEKRKD QEELSDGGTT  120
YSYKKTKPTT TPNTTTITIS TSSVGMDYRY RGEYRKDREE WSDTAIGTLL DAYMEKFVQL  180
NRGNLRGRDW EEVATIVSER CDKQKAGKSV EQCKNKVDNL KKRYKVELNR MNSSGSTVSH  240
WPWFKKIEQI VGNSPSSKAV SDEDKSPGSS ANMLRQPKRY AVIAPRPVGM GNTMNPKSLS  300
NPRWQRVVFK ISGAALAGTG PQNIDPKVAM LIAREVAMAC RLGVEVAIVI GGRNFFCGDT  360
WVAATGLDRS TAYQIGMMAT VMNSVLLQSA LEKQGVQTRV QTAFPMHEVA EPYSKRRAIR  420
HLEKGRVVIF GGVGAGTGNP LFTTDTAAAL RASEINAEAV LKGTNVDGVY DSQSRNNNNV  480
AFEHISYREL VSRGVTSMDM MAITFCEENG IPVVVFNLLE PGNISRALCG NQVGTLIDQS  540
GRMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein