PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17883.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 225aa MW: 25968.1 Da PI: 6.5319

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.3	2.3e-17	67	118	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +qle Le+ F+++ ++ e++ +LA++lgL+ r+V vWFqNrRa++k OVA17883.1 67 RRMRWDQLESLERSFQEEIKLEPERKIRLAQELGLQPRKVAVWFQNRRARWK 118 456779*********************************************9 PP
2	HD-ZIP_I/II	110.2	1.4e-35	64	155	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+ +q+++LE+sF+ee kLeperK +la+eLglqpr+vavWFqnrRAR+k+kqlE+ y+aLk+++d +++e+ +L++ev +L+++l+ OVA17883.1 64 ERKRRMRWDQLESLERSFQEEIKLEPERKIRLAQELGLQPRKVAVWFQNRRARWKAKQLERLYDALKQEFDVVSREKLKLQEEVMKLKAKLD 155 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAWNDKLRPL MASGAGGEHT VTFLYDYNFH HLPERHQVIE GERPPPINNN SNSSSSSNNN 60 NNQERKRRMR WDQLESLERS FQEEIKLEPE RKIRLAQELG LQPRKVAVWF QNRRARWKAK 120 QLERLYDALK QEFDVVSREK LKLQEEVMKL KAKLDDQAVA IQGSKGCTEA SAEIDETDES 180 KSVVINSSTM LQGAIADCNY VFNVDDYNTG SLPYLGILPG YPYTY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	1e-45	HD-ZIP family protein