PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18032.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 219aa MW: 23564.4 Da PI: 5.5946

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.5	2.9e-35	32	132	5	88
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec...eaessss 80 +++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++ti+WLl+qa+p+i+++tgt + ++ssss OVA18032.1 32 RRTSKDRHTKVNGRGRRVRIPALCAARIFQLTRELGHSSDGETIDWLLRQAEPSIIAATGTgvtpaacdtgpfpspsppppP------PpppPPHSSSS 124 6789*********************************************************766666666666554332220......12323333333 PP TCP 81 sasnsssg 88 + s+sss+ OVA18032.1 125 TPSSSSSP 132 33333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MDSEFNFTDH QPNPISAIPP TDSSKTNQLA IRRTSKDRHT KVNGRGRRVR IPALCAARIF 60 QLTRELGHSS DGETIDWLLR QAEPSIIAAT GTGVTPAACD TGPFPSPSPP PPPPPPPPPH 120 SSSSTPSSSS SPSAPFKAPE LVQVMPENPD LSGFLPVSRF ESPSPLNCRL DLGQPLGLDF 180 SIGDAYRHMP FTTMLLQAAN GGDGEEQQQL PLQVFNEQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	6e-35	TCP family protein