PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18067.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GATA
Protein Properties Length: 346aa    MW: 38016.6 Da    PI: 7.8118
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.6e-17261294134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  OVA18067.1 261 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MFGPAFTDDT NNCGDFFDNI DDLLNFPLED VESGDFNNLR SVWSPPPPPQ TDVLASSTAV  60
FSDTNNTTSS ELPPTGLSVP YEDFPQLEWL SSFMEDSFSA GSIIPDKVTF ASVTDNKNNN  120
SSNNNTNNDF HHPFQTSSPV SVLESSSSCS GGKTMLLNAE TFIRGRARSK RPRPAAFNPR  180
SVIQLISPTS SVTDATTTSS ELLSEIGNHA ESRLVTKISE PNTSFESKQK KIKIKKRKLP  240
PLPGSVYHQT GAPSTTPARK CLHCEITKTP QWRAGPMGPK TLCNACGVRY KSGRLYPEYR  300
PAASPTFVAA LHSNSHKKVL EMRIRSCEKL QQPEFMPKGS HLVEQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170174KRPRP
2229238QKKIKIKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.26e-40GATA family protein