PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18068.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 728aa MW: 79758.8 Da PI: 6.9299

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.5	5.4e-23	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g+ W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF +++++ l OVA18068.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RTENGDL 216 89**************************996555555..8999*****************************************..4588999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ OVA18068.1 217 CVGIRRA 223 **997 PP
2	Auxin_resp	115.4	4.9e-38	291	374	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk+++v++a+++++++GmRfkmafetedss++++ +Gt+++v+ +dpv WpnS+Wr+L+ OVA18068.1 291 AATLAANGQPFEVVYYPRASTPEFCVKASSVRAATRIPWCAGMRFKMAFETEDSSRISWfMGTISSVQVVDPVCWPNSPWRLLQ 374 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MIAFADSATE PIKEMEKCLD SQLWHACAGG MVQMPTVNSK VFYFPQGQAE HAHGNVDFGN 60 SQRVPAYILC RVAAVKFMAD PESDEVYAKI RLVPLRNNEP DYEDDGVLGN TGSEVPEKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVLAKDVHGE IWKFRHIYRG 180 TPRRHLLTTG WSTFVNHKKL VAGDSIVFLR TENGDLCVGI RRAKRGIGGG PESLSGWNPA 240 AGNCVSPYAG FSVFLREDDN KLTRNGNGGN SSSSGSLRGR ERVRPESVIE AATLAANGQP 300 FEVVYYPRAS TPEFCVKASS VRAATRIPWC AGMRFKMAFE TEDSSRISWF MGTISSVQVV 360 DPVCWPNSPW RLLQVTWDEP DLLQNVKRVS PWLVELVSNM PAIHLSPFSP PRKKLRLPQH 420 PDFPLDGQFQ LPSFSTNPLG PSSPLCCLSD NTPAGIQGAR HTQFGTSLTD LHLNKLQSGL 480 YPSCFRSLDH TVPPSRTSDS LIMSNANSSD NVSCLLTIGN SSPSSKKSTE AKTPQFVLFG 540 QPILTEQQIS LSFSSDAVSQ VLTGNSSSDG NPEKILNSHV GYASAVYQRG QRENSSSEGC 600 PFFKDRQIID LGLETGHCKV FMESEDVGRT LDLSVLGSYE ELYRKLADMF GVERSEMLNH 660 VLYQDVIGAV KHTGDEPFSE FKKAARRLTV LADAGSDNLG KRTRMTGLRN AETGLDTSSK 720 TGQLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MIAFADSATE PIKEMEKCLD SQLWHACAGG MVQMPTVNSK VFYFPQGQAE HAHGNVDFGN  60
SQRVPAYILC RVAAVKFMAD PESDEVYAKI RLVPLRNNEP DYEDDGVLGN TGSEVPEKPA  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVLAKDVHGE IWKFRHIYRG  180
TPRRHLLTTG WSTFVNHKKL VAGDSIVFLR TENGDLCVGI RRAKRGIGGG PESLSGWNPA  240
AGNCVSPYAG FSVFLREDDN KLTRNGNGGN SSSSGSLRGR ERVRPESVIE AATLAANGQP  300
FEVVYYPRAS TPEFCVKASS VRAATRIPWC AGMRFKMAFE TEDSSRISWF MGTISSVQVV  360
DPVCWPNSPW RLLQVTWDEP DLLQNVKRVS PWLVELVSNM PAIHLSPFSP PRKKLRLPQH  420
PDFPLDGQFQ LPSFSTNPLG PSSPLCCLSD NTPAGIQGAR HTQFGTSLTD LHLNKLQSGL  480
YPSCFRSLDH TVPPSRTSDS LIMSNANSSD NVSCLLTIGN SSPSSKKSTE AKTPQFVLFG  540
QPILTEQQIS LSFSSDAVSQ VLTGNSSSDG NPEKILNSHV GYASAVYQRG QRENSSSEGC  600
PFFKDRQIID LGLETGHCKV FMESEDVGRT LDLSVLGSYE ELYRKLADMF GVERSEMLNH  660
VLYQDVIGAV KHTGDEPFSE FKKAARRLTV LADAGSDNLG KRTRMTGLRN AETGLDTSSK  720
TGQLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein