PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18113.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 802aa MW: 89133.9 Da PI: 5.8837

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.2	7.5e-24	166	267	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + +++el+ OVA18113.1 166 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVATDLHGVQWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGENGELR 261 99**************************963.3445679*********************************************..4499999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ OVA18113.1 262 LGIRRA 267 ***996 PP
2	Auxin_resp	118.5	5.6e-39	292	374	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a+a+stks F+v+++Pras++eFv++++k+ k+++++v++GmRfkm+fe+ed +err+sG+v+g+ d+dp+rW++SkWr+Lk OVA18113.1 292 VANAVSTKSLFHVFHSPRASPAEFVIPYQKYIKSITHPVAIGMRFKMRFEMEDTAERRCSGLVTGIGDMDPYRWRDSKWRCLK 374 689******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
MEIDLNHAVK EGENIECFHG DCDKDGGGGG GCSLSSSSSC CSSNSVSSSI YLELWHACAG 60 PLTSLPKKGS VVVYFPQGHL EQATSCSSLS CLEMPTFGLQ PQIFCRVVNV QLLANKENDE 120 VYTQLTLFPQ PELGERNLVG KEHEEEVGVE EEGAGDLPSK STPHMFCKTL TASDTSTHGG 180 FSVPRRAAED CFPPLDYKQQ RPSQELVATD LHGVQWRFRH IYRGQPRRHL LTTGWSIFVS 240 QKNLVSGDAV LFLRGENGEL RLGIRRAGRP RNSIPNSILG NQNMNLNVLS PVANAVSTKS 300 LFHVFHSPRA SPAEFVIPYQ KYIKSITHPV AIGMRFKMRF EMEDTAERRC SGLVTGIGDM 360 DPYRWRDSKW RCLKVIWDDD LVGNHQDQIS PWEIEPSSSI PALSVASVPR PKKLRTMEST 420 SPDHPVTAGR VEFLDFDESV RSSKVLQGQE KVGFRSPFYV GDEKNQLVDF AMPNPTSRSL 480 SSTGFQEIDI SGRIHAQPST YTGFMESARF QVLQGQENFP FISAHGRTDF NQIGSDTSNL 540 RSALFNSYQR AYPNFYPLAS NDVRTTCMPY ADKRKENHDY MTNFQRGTVQ SNISSIQRRF 600 PGLTGDEICS PSTTNLVKEQ KSPIDLSAPA VIDADPKNHN DEVQDGTKVC KLFGFSLTGE 660 VQVPNSNSQN SSKRSCTKVH KQGNLVGRAV DLSRLSSYSD LISELEKLFN MEGLLSNPEE 720 GWQIVYTDSE NDMMVVGDDP WHEFCRIVSK IHIYTQEEVE KMTIGMISDD TQSCLEEAPA 780 IVDVSKSSSV GQPDSSPTVT RI

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

MEIDLNHAVK EGENIECFHG DCDKDGGGGG GCSLSSSSSC CSSNSVSSSI YLELWHACAG  60
PLTSLPKKGS VVVYFPQGHL EQATSCSSLS CLEMPTFGLQ PQIFCRVVNV QLLANKENDE  120
VYTQLTLFPQ PELGERNLVG KEHEEEVGVE EEGAGDLPSK STPHMFCKTL TASDTSTHGG  180
FSVPRRAAED CFPPLDYKQQ RPSQELVATD LHGVQWRFRH IYRGQPRRHL LTTGWSIFVS  240
QKNLVSGDAV LFLRGENGEL RLGIRRAGRP RNSIPNSILG NQNMNLNVLS PVANAVSTKS  300
LFHVFHSPRA SPAEFVIPYQ KYIKSITHPV AIGMRFKMRF EMEDTAERRC SGLVTGIGDM  360
DPYRWRDSKW RCLKVIWDDD LVGNHQDQIS PWEIEPSSSI PALSVASVPR PKKLRTMEST  420
SPDHPVTAGR VEFLDFDESV RSSKVLQGQE KVGFRSPFYV GDEKNQLVDF AMPNPTSRSL  480
SSTGFQEIDI SGRIHAQPST YTGFMESARF QVLQGQENFP FISAHGRTDF NQIGSDTSNL  540
RSALFNSYQR AYPNFYPLAS NDVRTTCMPY ADKRKENHDY MTNFQRGTVQ SNISSIQRRF  600
PGLTGDEICS PSTTNLVKEQ KSPIDLSAPA VIDADPKNHN DEVQDGTKVC KLFGFSLTGE  660
VQVPNSNSQN SSKRSCTKVH KQGNLVGRAV DLSRLSSYSD LISELEKLFN MEGLLSNPEE  720
GWQIVYTDSE NDMMVVGDDP WHEFCRIVSK IHIYTQEEVE KMTIGMISDD TQSCLEEAPA  780
IVDVSKSSSV GQPDSSPTVT RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein