PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18117.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family S1Fa-like
Protein Properties Length: 76aa    MW: 8473.36 Da    PI: 11.0352
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA136.55.9e-431076470
        S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                + v akG+nPGlivllvv glll+flvgny+lyvyaqknlPPrkkkPvskkk+kre+lkqGv++PGe
  OVA18117.1 10 NVVKAKGFNPGLIVLLVVVGLLLIFLVGNYVLYVYAQKNLPPRKKKPVSKKKMKRERLKQGVSAPGE 76
                56789*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MNKHCKIDGN VVKAKGFNPG LIVLLVVVGL LLIFLVGNYV LYVYAQKNLP PRKKKPVSKK  60
KMKRERLKQG VSAPGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37120.13e-06S1Fa-like family protein