PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18187.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 284aa    MW: 31343.1 Da    PI: 6.5144
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25.2e-153478147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I  ++g  +t  q++s+ qky
       OVA18187.1 34 RESWTEEEHDKFIEALQLFDRD-WKKIEDYVG-SKTVIQIRSHAQKY 78
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MNASSSSPQS MAASTSTDLS GKKVRKPYTI TKSRESWTEE EHDKFIEALQ LFDRDWKKIE  60
DYVGSKTVIQ IRSHAQKYFL KVQKNGTIAH VPPPRPKRKA VHPYPHKALR NEPLQASMAY  120
PSTLSDFLTG HSPWDETSVL ISSTSNGIVL SQDDYTTIHG IGADIGSNEL ARIGNSSNSG  180
MGGSSRILPS FDTPKQGIPD FAEVYGFIGS VFDPDTNGHM QKLKEMDPIN FETVLLLMRN  240
LTLNLSSPEF EPIRNVLSSY DVDTETGGTS GAIAMDHNKD HLPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-100MYB_related family protein