PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18208.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WRKY

Protein Properties

Length: 481aa MW: 52681.3 Da PI: 9.6275

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.6	2.2e-32	199	255	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkver+ d+++ ei+Y+geHnh+k OVA18208.1 199 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERTF-DGQIAEIVYKGEHNHSK 255 9*************************************.*************85 PP
2	WRKY	103.9	9e-33	399	455	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 Dg++WrKYGqK+vkg+++prsYYrC+s +C+v+k+vers +dp+++++tYeg+Hnh OVA18208.1 399 GDGFRWRKYGQKVVKGNPHPRSYYRCSSLKCNVRKHVERSLDDPSAFITTYEGKHNH 455 5******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MELKDTDKRK IIAKPVASRP SCSKFQSFSA LLTGAINTSP PASSSETAVA AIRPKTVRLK 60 PSESWASTGI VSSQGEASGT AAVCYSSDKP LKSEIKSNVV FKPLAKLVSR TTVSQLANLG 120 NSDTSHQQAT VQLQPCVQHS DQAKHHVQTP PTSDLHRNLS SPVRMNQIMN DSSKLASRRP 180 KENQRDLLPT TSGDRPSYDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERTFDG 240 QIAEIVYKGE HNHSKPQPPK RHSSGTPEQG LGSDGTGQET SNTLWSSSLN ERNEGSESRM 300 ENYSSIGFSV NPSYTGKAPM IYDSVTTGAF NNSLGTPDNS CGLSGDYDEG SRRGDAEDDE 360 PKFKQRKKEH QSSDGGIVPQ GVPDPRVVLQ ASTDAEILGD GFRWRKYGQK VVKGNPHPRS 420 YYRCSSLKCN VRKHVERSLD DPSAFITTYE GKHNHGIPST RNLNSSASDP DSAAPSYKAN 480 Q

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MELKDTDKRK IIAKPVASRP SCSKFQSFSA LLTGAINTSP PASSSETAVA AIRPKTVRLK  60
PSESWASTGI VSSQGEASGT AAVCYSSDKP LKSEIKSNVV FKPLAKLVSR TTVSQLANLG  120
NSDTSHQQAT VQLQPCVQHS DQAKHHVQTP PTSDLHRNLS SPVRMNQIMN DSSKLASRRP  180
KENQRDLLPT TSGDRPSYDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERTFDG  240
QIAEIVYKGE HNHSKPQPPK RHSSGTPEQG LGSDGTGQET SNTLWSSSLN ERNEGSESRM  300
ENYSSIGFSV NPSYTGKAPM IYDSVTTGAF NNSLGTPDNS CGLSGDYDEG SRRGDAEDDE  360
PKFKQRKKEH QSSDGGIVPQ GVPDPRVVLQ ASTDAEILGD GFRWRKYGQK VVKGNPHPRS  420
YYRCSSLKCN VRKHVERSLD DPSAFITTYE GKHNHGIPST RNLNSSASDP DSAAPSYKAN  480
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-100	WRKY family protein