PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18279.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 263aa MW: 30324.3 Da PI: 6.2636

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv++v ++Gg++W+ Ia+ g++Rt+k+c+ rw +yl OVA18279.1 15 KGPWTEQEDLQLVCYVGLFGGRRWDFIAKVSGLNRTGKSCRFRWVNYL 62 79********************************************97 PP
2	Myb_DNA-binding	53	7.7e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ ++++ ++G++ W++Iar+++ gRt++++k++w++++ OVA18279.1 68 RGRMTPQEERVVLQLHSRWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MMKMVQSAGD HQIRKGPWTE QEDLQLVCYV GLFGGRRWDF IAKVSGLNRT GKSCRFRWVN 60 YLHPGLKRGR MTPQEERVVL QLHSRWGNRW SKIARKLPGR TDNEIKNYWR THMRKEVQEM 120 RKRDTMISMI TTMVESPTKS QNIMEGDSSN LNGKGSCVTD FAVRGDDVSE EEEEEEEDYS 180 MDQIWKEIAS PEEHVNSTTS QVFYRGTKEE ATCSFSSCPP LMASPLWELG SESLWTMDEG 240 ETNMLAPMVS VISTNEHKPG RVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-79	MYB family protein