PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18282.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 238aa    MW: 27461.9 Da    PI: 5.1104
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.1e-174186148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rgr+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
       OVA18282.1 41 RGRMTPQEERLVLELHSRWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 86
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEVEGAMYLN LPWLILFVGL NRTGKSCRLR WVNYLHPGLK RGRMTPQEER LVLELHSRWG  60
NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEMRKRATMM PSASSSTITT MVESPTKSQN  120
IIEGDSSNLN GKGSCVTDFA VRGNEVSEEE EEEEEEDYSM DQIWKEIASS EEEVNSEQVF  180
DGVSKKEGCS FSCPPMDSPL WEFGSDPLWK MDDEFKMLAP MGGTADRFVF NYVHRGES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.24e-61MYB_related family protein