PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18334.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WOX

Protein Properties

Length: 305aa MW: 34701.4 Da PI: 8.1438

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62	8.9e-20	22	81	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R++++keq+ Le l+++ r+psae++++++++l +++ ++V++WFqN++a++++ OVA18334.1 22 CRWNPKKEQISMLEGLYRQgIRTPSAEQIQQITSRLkvygHIEGKNVFYWFQNHKARQRQ 81 5***************99************************************96 PP
2	Wus_type_Homeobox	112.9	1.7e-36	21	83	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 + RW+P++eQi +Le ly++G+rtP++e+iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqkq OVA18334.1 21 CCRWNPKKEQISMLEGLYRQGIRTPSAEQIQQITSRLKVYGHIEGKNVFYWFQNHKARQRQKQ 83 68***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEEHKNNNDG GSSPGASSSS CCRWNPKKEQ ISMLEGLYRQ GIRTPSAEQI QQITSRLKVY 60 GHIEGKNVFY WFQNHKARQR QKQKQENMLY LNRFLHKPSH PLYAPPPPPC NNVLCNPFYI 120 PSHTASTINN GYYQQYPITN LPLMPGGVLR RSPRVVDYKE VEKKRSTDSA GYEAALMNNR 180 LDGRHAGDFN EDKFIINTPT YSTASSSRSS SHETLALFPL HPTGVLEEKY STSRNYYYSS 240 HPPPPPPSSS AENINNSNLS NNNNSSSEIS CLKEIMSTTS TDHPFFDFFA EQDHYCEHFN 300 TITHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	9e-42	WOX family protein