PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18433.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 231aa    MW: 26479.4 Da    PI: 4.6367
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-172671148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
       OVA18433.1 26 RGNITEDEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 71
                     7999******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGAGLNRCGK SCRLRWLNYL RPGIKRGNIT EDEEDLIIRL HNLLGNRWSL IAGRLPGRTD  60
NEIKNHWNTH LSKKSLTIDE LNLKLNQKLE SNTNTHTRSM LQTTSSNIPI TSDLDWVGTS  120
QSNDTFKRLN EKDMTKPTDE FLDDDLDING FFDFPVHAEL PASYPFVGSS ESRLPEDYNS  180
LGDDIYHKFL DSELYVHGSS MGSLDEQFPC DIERLLYSEE DDNVFLTFSQ T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.16e-42MYB family protein