PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18740.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 453aa MW: 50886.8 Da PI: 6.132

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.1e-10	259	306	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OVA18740.1 259 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 306 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MLHCLQTSGN LAGNGTDVTV LERQRARLKW QQQQQNQQSH DQEPQQSYFN ETHFNNFLQL 60 PSTTSNFDQS FINNDSLIRE LVNRSIKTDP SLDNGWSNFE KYPVPRTGFG GETTGLSSTG 120 FGTNSLDMTN FSISRTSSCP PEVGNALPPM GIAAVAQEKS RQVGSSEKMA STVGRESFKK 180 RKADKAQNPK VGVAEETKDK RIKVDTEEVE SKVTHHEQKN NNNNRETSAD TSKDNSKISE 240 VQKPDYIHVR ARRGQATDSH SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLDEIIN 300 YVQSLQRQVE FLSMKLAAVN PRLDINIDNF FTKDMFPACT GIFPTVGMSQ EMANCPTYLQ 360 FNPVQEIVSS CGLDMVINPP EMAALRRTIS APISAPETFL DNSCFTQEQP TSTWETDFQN 420 LYNIEEFHQG RPTVFPPQSF TGTLEANNLK MEM

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MLHCLQTSGN LAGNGTDVTV LERQRARLKW QQQQQNQQSH DQEPQQSYFN ETHFNNFLQL  60
PSTTSNFDQS FINNDSLIRE LVNRSIKTDP SLDNGWSNFE KYPVPRTGFG GETTGLSSTG  120
FGTNSLDMTN FSISRTSSCP PEVGNALPPM GIAAVAQEKS RQVGSSEKMA STVGRESFKK  180
RKADKAQNPK VGVAEETKDK RIKVDTEEVE SKVTHHEQKN NNNNRETSAD TSKDNSKISE  240
VQKPDYIHVR ARRGQATDSH SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLDEIIN  300
YVQSLQRQVE FLSMKLAAVN PRLDINIDNF FTKDMFPACT GIFPTVGMSQ EMANCPTYLQ  360
FNPVQEIVSS CGLDMVINPP EMAALRRTIS APISAPETFL DNSCFTQEQP TSTWETDFQN  420
LYNIEEFHQG RPTVFPPQSF TGTLEANNLK MEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-62	bHLH family protein