PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18873.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 224aa    MW: 25188.7 Da    PI: 10.0874
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF702.1e-221765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie +  rqv fskRr g++KKA+EL++LC+ae avi+fs+ gk y +
  OVA18873.1 17 KRIEKQNARQVAFSKRRVGLFKKASELCTLCAAETAVIVFSPAGKSYSF 65
                79*******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSSKRKPSMG RQKIEIKRIE KQNARQVAFS KRRVGLFKKA SELCTLCAAE TAVIVFSPAG  60
KSYSFGHPSI DTVVDRYLSG GNYASQNVNG IHPHVRAHVG ELNRQYTKAL NELEAEKKRG  120
MELKKVRRDS RNQHWWEKPI EELGLQELEQ LKAAMDKLKV NVADRADELL IKDSHFMPTA  180
DPIGTSSTIQ HGYPFEPNPN YLHTSVVPNH GYGYGFGFGR PGPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-45M-type_MADS family protein