PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA19126.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 253aa    MW: 29273.8 Da    PI: 5.833
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA19126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.44.1e-2267157190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 ++Y +YA++ GF++r++++++s+ +  ++  ++vCskeg+r ++   ++++   ++++r+gC+a l++  ++  +kw+vt+++ eHnH+l+
  OVA19126.1  67 EYYGAYARRNGFTIRVNRKRRSRIDCAVIGFDYVCSKEGFRPKRCLGEDRTIMLSKQSRVGCRAILVIAYRReIEKWVVTNFVREHNHDLM 157
                 59******************************************999899999****************99989**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MESTSRQGDD LMGNNMASEG ETSCELETEE CDDTSRNDSQ LVELTGVVGP SEPYIGMEFK  60
SADDGREYYG AYARRNGFTI RVNRKRRSRI DCAVIGFDYV CSKEGFRPKR CLGEDRTIML  120
SKQSRVGCRA ILVIAYRREI EKWVVTNFVR EHNHDLMGPS ELLVRRSSVK ASTEDEKDKR  180
IRELTAELYN ERQRFQRRCS AYEERCAAYK VQLGKILKDV ELHSDHLTER VPGILQTIKE  240
IEDEYFDSQP QSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-38FAR1 family protein