PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA19177.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 123aa    MW: 14129 Da    PI: 5.2724
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA19177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.23.6e-1546122181
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                 +f+++YA++vGF +rk++++k   +g   + tf C   gk++++ ++   + ++r++t+tgCk k++ + e d+kw ++++
  OVA19177.1  46 DFFKTYARQVGFPIRKRSTNKD-GDGVLRWVTFACAWGGKTNTTFSN---SLKPRPNTQTGCKVKITARFELDEKWIISQV 122
                 6****************99997.9999*************9998877...999*************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MEVESSDVEI LGDDVVDVDY ELKKDQNEIV EPKVGMRFAS HEELYDFFKT YARQVGFPIR  60
KRSTNKDGDG VLRWVTFACA WGGKTNTTFS NSLKPRPNTQ TGCKVKITAR FELDEKWIIS  120
QVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-12FAR1 family protein