PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19271.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 1163aa MW: 129457 Da PI: 6.3472

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69	6.7e-22	133	235	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +++++++l+ OVA19271.1 133 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDTAWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI-SRDEKQHLL 229 99***************************9445444.38********************************************.5559999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ OVA19271.1 230 LGIRRA 235 ***997 PP
2	Auxin_resp	119.3	3.1e-39	260	343	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ ++vs+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+ S+Wr+L+ OVA19271.1 260 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsNQVSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRNLQ 343 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MKAPANGAVA SATGTANPCE GERKSINSEL WHACAGPLVT LPPVGSLVVY FPQGHSEQVA 60 ASMQKDVDAH IPNYPNLPSK LICLLLNVTL HADAETDEVY AQMTLQPVST YDKEALLASD 120 LALKSNKPQT EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFSMQPPA QELVARDLHD 180 TAWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVLFI SRDEKQHLLL GIRRANRQPT 240 NISSSVLSSD SMHIGILAAA AHAAANNSPF TVFYNPRASP SEFVIPLAKY YKAVYSNQVS 300 LGMRFRMMFE TEESGTRRYM GTITGISDLD PVRWKSSQWR NLQVGWDEST AGERRNRVSL 360 WEIEPVAAPF FICPPPFFRS KRPRQPGMPD DESSDLENLF KRTMPWLGDD ICMKDAQAQN 420 AVIPGFSLAQ WMSMQQNPSL GNSTMQPDYM RSLTSPVLQN LAAADLSRQL GLPGSQLLQQ 480 NLQFNAQRPA QQPQQLDQLP KLPTTLNQIN QLGSIMRPQQ PLDEITQQQR QNLVNQTISA 540 NQVQAQLLQP HFQVQNHQIQ QQQQLLIQNN QPHSNLLQNQ QQQQQQPQQQ QQQQQPQQQQ 600 QQPQQQQQQQ MQQQQQPPQP QQQQQHQLIA GQNQQQNRHS MQLPHQVNQQ LQMSEHQIQM 660 QLLQKLQQQR QAILSQQSTL QQPPQLTQLQ DQQRQLSEMP QSLSNLNSLS QHQMIQQQTM 720 KNNSQQGIRF SHLPQQHQSQ PNLQQQATTL AELSGLVLPP DPITNLLPTT GGLLAPPGCG 780 VQSGLTEDVP SCSTSPSTNC PSVAQPIINS QSHRSTVIVD EVTQSAATLL SPGALEAMST 840 NLNLVKELQQ KPDTKPSLPI SKSQNQGIVG SQTYLNPMTQ LDYLEASSSV TSVCLSQNDG 900 SLQQNFPLSS FNPQSMLFRD TSQDGDVQLD PRNNVLFGVN IDGPLGIPMA PDTLLAKGMD 960 PVKDFQNNFS GDMMTNYGNS KDVQQEPSSS IVSQSFGVPD MAFNSIDSTI TDSGFLNKGP 1020 WAPAPQLPKM RTFTKVHKRG AVGRSIDITR YSGYDELKQD LARRFGIEGQ LEDHQRVGWK 1080 LVYVDHENDV LLVGDDPWEE FVNCVRCIKI LSPQEVQQMS LDGDLGNSVL SNQACSSSDG 1140 GNPWRTGQYD QNSGNPSAGS YDQ

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MKAPANGAVA SATGTANPCE GERKSINSEL WHACAGPLVT LPPVGSLVVY FPQGHSEQVA  60
ASMQKDVDAH IPNYPNLPSK LICLLLNVTL HADAETDEVY AQMTLQPVST YDKEALLASD  120
LALKSNKPQT EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFSMQPPA QELVARDLHD  180
TAWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVLFI SRDEKQHLLL GIRRANRQPT  240
NISSSVLSSD SMHIGILAAA AHAAANNSPF TVFYNPRASP SEFVIPLAKY YKAVYSNQVS  300
LGMRFRMMFE TEESGTRRYM GTITGISDLD PVRWKSSQWR NLQVGWDEST AGERRNRVSL  360
WEIEPVAAPF FICPPPFFRS KRPRQPGMPD DESSDLENLF KRTMPWLGDD ICMKDAQAQN  420
AVIPGFSLAQ WMSMQQNPSL GNSTMQPDYM RSLTSPVLQN LAAADLSRQL GLPGSQLLQQ  480
NLQFNAQRPA QQPQQLDQLP KLPTTLNQIN QLGSIMRPQQ PLDEITQQQR QNLVNQTISA  540
NQVQAQLLQP HFQVQNHQIQ QQQQLLIQNN QPHSNLLQNQ QQQQQQPQQQ QQQQQPQQQQ  600
QQPQQQQQQQ MQQQQQPPQP QQQQQHQLIA GQNQQQNRHS MQLPHQVNQQ LQMSEHQIQM  660
QLLQKLQQQR QAILSQQSTL QQPPQLTQLQ DQQRQLSEMP QSLSNLNSLS QHQMIQQQTM  720
KNNSQQGIRF SHLPQQHQSQ PNLQQQATTL AELSGLVLPP DPITNLLPTT GGLLAPPGCG  780
VQSGLTEDVP SCSTSPSTNC PSVAQPIINS QSHRSTVIVD EVTQSAATLL SPGALEAMST  840
NLNLVKELQQ KPDTKPSLPI SKSQNQGIVG SQTYLNPMTQ LDYLEASSSV TSVCLSQNDG  900
SLQQNFPLSS FNPQSMLFRD TSQDGDVQLD PRNNVLFGVN IDGPLGIPMA PDTLLAKGMD  960
PVKDFQNNFS GDMMTNYGNS KDVQQEPSSS IVSQSFGVPD MAFNSIDSTI TDSGFLNKGP  1020
WAPAPQLPKM RTFTKVHKRG AVGRSIDITR YSGYDELKQD LARRFGIEGQ LEDHQRVGWK  1080
LVYVDHENDV LLVGDDPWEE FVNCVRCIKI LSPQEVQQMS LDGDLGNSVL SNQACSSSDG  1140
GNPWRTGQYD QNSGNPSAGS YDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein