PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19433.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 516aa MW: 56393.4 Da PI: 7.067

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.5	1.3e-16	132	220	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ +l+rg+l++ +Weev++ + ++++ +s +qCk+k +nl+kryk + +++++ +++s++p+f+++e OVA19433.1 132 EWSDTAIGCLLDAYTEKFMQLNRGNLRGRDWEEVAAIVsercEKQKAGKSVEQCKNKVDNLKKRYKVELQRMSNS-GTTVSHWPWFKKIE 220 5******************************998887766889999**************999998884.77888*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MASCDDDFAL LGDETQNPHH HHHQTFNNLG GGESPKKVGG ATLDAADGEE DYNSANPFHD 60 VNSFAADDEA NPFVADEDKS RANSQPEKRK DHEELSDGGS PYYKKSRSGG SSIIGIPVVG 120 YYRVDCRKDR EEWSDTAIGC LLDAYTEKFM QLNRGNLRGR DWEEVAAIVS ERCEKQKAGK 180 SVEQCKNKVD NLKKRYKVEL QRMSNSGTTV SHWPWFKKIE QVITNSPSSK TVSDEDKSGS 240 ASANMLRQSK RYPISTPSSG GFVPIKPKIS LPNPRWRRVV FKISGASLVG AGPQKIDPKV 300 TMLIAREVAM ACRLGVEVAI VVGGRNFFCG DSWVAATGLD RSTAYQIGMM ATVMNSVLLQ 360 SALEKLNVQT RIQSAYPMQE VAEPYSKRRA IRHLEKGRVV IFGGIGAGTG NPLFTTDTAA 420 ALRASEINAE AVLKGTNVDG VYDCHSGNNN NVAFEHISYR ELVSRGVTSM DMMAITFCEE 480 NGIPVVVFNL LEPGNISRAL CGDQVGTLID QAGRIS

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MASCDDDFAL LGDETQNPHH HHHQTFNNLG GGESPKKVGG ATLDAADGEE DYNSANPFHD  60
VNSFAADDEA NPFVADEDKS RANSQPEKRK DHEELSDGGS PYYKKSRSGG SSIIGIPVVG  120
YYRVDCRKDR EEWSDTAIGC LLDAYTEKFM QLNRGNLRGR DWEEVAAIVS ERCEKQKAGK  180
SVEQCKNKVD NLKKRYKVEL QRMSNSGTTV SHWPWFKKIE QVITNSPSSK TVSDEDKSGS  240
ASANMLRQSK RYPISTPSSG GFVPIKPKIS LPNPRWRRVV FKISGASLVG AGPQKIDPKV  300
TMLIAREVAM ACRLGVEVAI VVGGRNFFCG DSWVAATGLD RSTAYQIGMM ATVMNSVLLQ  360
SALEKLNVQT RIQSAYPMQE VAEPYSKRRA IRHLEKGRVV IFGGIGAGTG NPLFTTDTAA  420
ALRASEINAE AVLKGTNVDG VYDCHSGNNN NVAFEHISYR ELVSRGVTSM DMMAITFCEE  480
NGIPVVVFNL LEPGNISRAL CGDQVGTLID QAGRIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein