PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19445.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 499aa MW: 56818.9 Da PI: 6.452

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.6	8e-24	128	229	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li ++ +++++ + + +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +++ +++++++ ++++ OVA19445.1 128 KWTDSMVRLLIMVVFYVGDDGGPEGndqssnckkksggilQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGtACRVVENQSLLE 226 7************9999999532256677889999999******************************************55********9 PP trihelix 84 qle 86 ++ OVA19445.1 227 TMD 229 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MEANSIPSGI LPGMGSGMLG LEMPLHHPHH HQHHPHPHHP HQQQHPFSNH HQQQQHHQMV 60 TFSTHESDPH NQSQQSVKQN AYPFTSKSKQ QPPQQQQIAL SDEDEPGFAA DDGGGDGRKR 120 VSPWQRVKWT DSMVRLLIMV VFYVGDDGGP EGNDQSSNCK KKSGGILQKK GKWKSVSRAM 180 MEKGFYVSPQ QCEDKFNDLN KRYKRVNDIL GRGTACRVVE NQSLLETMDH IPPKMKEEVK 240 KLLNSKHLFF REMCAYHNSG GAGGGGGGAA GTHQISDAAV ESSQHQQQQR CFHSSQSAVG 300 VGNSRTRADA EGLKMVKGGI SREEEEDEDG EDEDDGEEDD EEDDDEDGEE TEDGGKCRKV 360 HGGGHEDEDD DEKLVPKKRQ RRVSPSIQQL SCELMNVLQD GTKNPWEQRQ WMRSRTMQLE 420 EQRVSYQCQA FELEKQRLKW VKFSGKKERE MERMKLNNER MRLENERMVL LLRQKELELF 480 DLHQQHSSSK RAEPSSMTG

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MEANSIPSGI LPGMGSGMLG LEMPLHHPHH HQHHPHPHHP HQQQHPFSNH HQQQQHHQMV  60
TFSTHESDPH NQSQQSVKQN AYPFTSKSKQ QPPQQQQIAL SDEDEPGFAA DDGGGDGRKR  120
VSPWQRVKWT DSMVRLLIMV VFYVGDDGGP EGNDQSSNCK KKSGGILQKK GKWKSVSRAM  180
MEKGFYVSPQ QCEDKFNDLN KRYKRVNDIL GRGTACRVVE NQSLLETMDH IPPKMKEEVK  240
KLLNSKHLFF REMCAYHNSG GAGGGGGGAA GTHQISDAAV ESSQHQQQQR CFHSSQSAVG  300
VGNSRTRADA EGLKMVKGGI SREEEEDEDG EDEDDGEEDD EEDDDEDGEE TEDGGKCRKV  360
HGGGHEDEDD DEKLVPKKRQ RRVSPSIQQL SCELMNVLQD GTKNPWEQRQ WMRSRTMQLE  420
EQRVSYQCQA FELEKQRLKW VKFSGKKERE MERMKLNNER MRLENERMVL LLRQKELELF  480
DLHQQHSSSK RAEPSSMTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	376	382	PKKRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-64	Trihelix family protein