PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19462.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 850aa MW: 95189.2 Da PI: 4.9036

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51	3.8e-16	674	729	25	75
trihelix 25 k.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 k +kk++W++vs++++e+gf +sp+qC++k+++ nk yk+++++ +k+t++ OVA19462.1 674 KssgplQKKGKWKSVSRAIMEKGFYVSPQQCEDKFNDPNKSYKRVNDILRKGTAGG 729 0445559********************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
MASKTYRVDL DGNPIKPITI CMIGAGGFIG SHLCEKLMSE TPHTVLAVDV YNDKIKHLLE 60 PDSLPWAGRI QFHRINIKHD SRLEGLIKVA DLTINLAAIC TPADYNTRPL DTIYSNFIDA 120 LPVVKYCSEN NKRLIHFSAC EIYGKTIGSF LPKDHPLRQD PEFYVLKEDV SPCIFGPIEK 180 QRWSYACAKQ LIERLIYSDG AENGLEFTIV RPFNWIGPRM DFFPGVDGPS EGVPRVLACF 240 SNNLLRGEPL KLVDGGQSQR TFIYIKDAIE TVMLMIVMVS LQNPARANGQ IFNVGNPNNE 300 VTVKQLAEMM TEVYCKVSGE PSLEVPTVDV SSKEFYGEGY DDSDKRIPDM TVINRQLGSL 360 GMVWDCWQVD LLESTLTYQH RTYAEAFHRI NIKHDSRLEG LIKMADLTVN LAAICTLADY 420 NTRPLDTIYS NFIDALPVVK YCSEKNKCLI HFSTCEIYGK TIGSFLPKDH PLRQVDLVPT 480 CDRGVLEHVH EIVILPHYKF TILDAEGAEN GLEYTIVRSF NWIGPRMDFI PGLMVQVRVF 540 LEFWYALNLL RGEPLKLVGG GQSQRTFIYV KDTTEAVMLM IENPARANGQ VFNVRNPNNE 600 VTVKQLAEMM TEVYSKVSGE PSIEVPTVDV SSKEFYGEGY DDNDKRIPDM TTINRQLDDG 660 GPEGNDPSSN CKKKSSGPLQ KKGKWKSVSR AIMEKGFYVS PQQCEDKFND PNKSYKRVND 720 ILRKGTAGGV RAVGVGNSRT RADAEGFKMV KGGISCEEEE DGEDEDDGGE EDEEETEDGG 780 KCQKVHGEPV GIEAVDEKSD DAVGGTKSEL EKQRLEWRRG DGEDQTQSAG YLDIKVMLLL 840 PSTHYVMSAT

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

MASKTYRVDL DGNPIKPITI CMIGAGGFIG SHLCEKLMSE TPHTVLAVDV YNDKIKHLLE  60
PDSLPWAGRI QFHRINIKHD SRLEGLIKVA DLTINLAAIC TPADYNTRPL DTIYSNFIDA  120
LPVVKYCSEN NKRLIHFSAC EIYGKTIGSF LPKDHPLRQD PEFYVLKEDV SPCIFGPIEK  180
QRWSYACAKQ LIERLIYSDG AENGLEFTIV RPFNWIGPRM DFFPGVDGPS EGVPRVLACF  240
SNNLLRGEPL KLVDGGQSQR TFIYIKDAIE TVMLMIVMVS LQNPARANGQ IFNVGNPNNE  300
VTVKQLAEMM TEVYCKVSGE PSLEVPTVDV SSKEFYGEGY DDSDKRIPDM TVINRQLGSL  360
GMVWDCWQVD LLESTLTYQH RTYAEAFHRI NIKHDSRLEG LIKMADLTVN LAAICTLADY  420
NTRPLDTIYS NFIDALPVVK YCSEKNKCLI HFSTCEIYGK TIGSFLPKDH PLRQVDLVPT  480
CDRGVLEHVH EIVILPHYKF TILDAEGAEN GLEYTIVRSF NWIGPRMDFI PGLMVQVRVF  540
LEFWYALNLL RGEPLKLVGG GQSQRTFIYV KDTTEAVMLM IENPARANGQ VFNVRNPNNE  600
VTVKQLAEMM TEVYSKVSGE PSIEVPTVDV SSKEFYGEGY DDNDKRIPDM TTINRQLDDG  660
GPEGNDPSSN CKKKSSGPLQ KKGKWKSVSR AIMEKGFYVS PQQCEDKFND PNKSYKRVND  720
ILRKGTAGGV RAVGVGNSRT RADAEGFKMV KGGISCEEEE DGEDEDDGGE EDEEETEDGG  780
KCQKVHGEPV GIEAVDEKSD DAVGGTKSEL EKQRLEWRRG DGEDQTQSAG YLDIKVMLLL  840
PSTHYVMSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-15	Trihelix family protein