PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19494.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 314aa MW: 33828.5 Da PI: 7.086

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	131	153	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OVA19494.1 131 YECKTCNRCFPSFQALGGHRASH 153 99**********99999998887 PP
2	zf-C2H2	13.6	0.0002	214	236	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H OVA19494.1 214 HECSICGSEFSSGQALGGHMRRH 236 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MEVVHQEEAM GSNEYNLHVV KGKRTKRQRP LSPLTVAMTT SSSSGGGGGG GGGGGRDDFN 60 FSSPTTSVEF SGSSEEEEDM ANCLILLAQG GHGRDGSSKQ IEESGATERL SSRRFGEIAI 120 TTTSKGGSYV YECKTCNRCF PSFQALGGHR ASHKRPNKQA MVEDKMKASS SAILMVEEEI 180 SQFINDQNSS PSLTLQMGNS TTLYSTTSNK SRVHECSICG SEFSSGQALG GHMRRHRTSS 240 TTTTVIPATT TATTTSMSSE FSHQEIITKK PKNVLSLDLN LPAPEEDHRE SKFLFSSKQQ 300 PLVFSASALV DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	9e-52	C2H2 family protein