PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19505.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 236aa MW: 27563.6 Da PI: 7.2546

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ v+++G ++W++Ia+ g++R++k+c++rw +yl OVA19505.1 14 KGPWLEEEDERLATFVTLMGERRWDSIAKVSGLRRSGKSCRLRWMNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.1	6.6e-16	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++eE+ ++++ +++G++ W++Iar+++ gRt++++k++w+++l OVA19505.1 68 GQMSAEEEHTILQLQQRWGNK-WSKIARKLP-GRTDNEIKNYWRTHL 112 6789***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MVCKEVIQDE TIRKGPWLEE EDERLATFVT LMGERRWDSI AKVSGLRRSG KSCRLRWMNY 60 LRPDLKHGQM SAEEEHTILQ LQQRWGNKWS KIARKLPGRT DNEIKNYWRT HLRKKAQVEE 120 QEKLQRERHK GGSTNAPQNF LIQRDVDDGK RSSFEHNGYV KEDILRTSEH SLDAFGSPNN 180 AFAVSPYENY FSDWISGSSN DQDVLKHNGQ CSISSDSWFH YSATWVSGDV DISIWD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	3e-66	MYB family protein